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  5. PSME_00056008-RA

PSME_00056008-RA


Description : (at2g30130 : 185.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056008-RA
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
58936 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
A4A49_03191 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
At1g16530 No alias LOB domain-containing protein 3... 0.04 Orthogroups_2024-Update
At2g40470 No alias LOB domain-containing protein 15... 0.04 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.03 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.02 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
Brara.E01292.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G079185 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
GRMZM2G092517 No alias LOB domain-containing protein 13 0.02 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.05 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.04 Orthogroups_2024-Update
GRMZM2G154320 No alias ASYMMETRIC LEAVES 2-like 1 0.02 Orthogroups_2024-Update
Glyma.11G164800 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.02 Orthogroups_2024-Update
Glyma.14G202300 No alias LOB domain-containing protein 13 0.02 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.05 Orthogroups_2024-Update
Glyma.15G228100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.20G023400 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
MA_161608g0010 No alias (at5g63090 : 189.0) Involved in lateral organ... 0.05 Orthogroups_2024-Update
MA_16891g0020 No alias (at5g63090 : 162.0) Involved in lateral organ... 0.04 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.06 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.06 Orthogroups_2024-Update
PSME_00044524-RA No alias (at1g31320 : 197.0) LOB domain-containing protein 4... 0.04 Orthogroups_2024-Update
PSME_00048626-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Potri.001G345700 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Potri.009G076900 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Potri.010G184400 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Potri.013G156200 No alias LOB domain-containing protein 15 0.03 Orthogroups_2024-Update
Potri.014G167100 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
Potri.019G127300 No alias LOB domain-containing protein 15 0.03 Orthogroups_2024-Update
Pp1s69_130V6 No alias ramosa 2 0.01 Orthogroups_2024-Update
Pp1s71_7V6 No alias MGF10.6; LOB domain protein 25 / lateral organ... 0.02 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.02 Orthogroups_2024-Update
Pp1s9_303V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.9G149300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc02g069440 No alias LOB domain protein (AHRD V3.3 *** G7JIR8_MEDTR) 0.03 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen06g016740 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update
Sopen12g034780 No alias Protein of unknown function DUF260 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 11 108
No external refs found!