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  5. PSME_00056054-RA

PSME_00056054-RA


Description : (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G02810.1); Has 2755 Blast hits to 2700 proteins in 321 species: Archae - 8; Bacteria - 597; Metazoa - 1; Fungi - 199; Plants - 1923; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (o04887|pme2_citsi : 449.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 942.0) & (original description: no original description)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056054-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_00993 No alias putative pectinesterasepectinesterase inhibitor 21 0.05 Orthogroups_2024-Update
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.01 Orthogroups_2024-Update
A4A49_03834 No alias putative pectinesterasepectinesterase inhibitor 61 0.01 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.01 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.01 Orthogroups_2024-Update
A4A49_38041 No alias putative pectinesterasepectinesterase inhibitor 36 0.01 Orthogroups_2024-Update
At1g23200 No alias Probable pectinesterase/pectinesterase inhibitor 6... 0.01 Orthogroups_2024-Update
At2g26450 No alias Probable pectinesterase/pectinesterase inhibitor 13... 0.01 Orthogroups_2024-Update
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.03 Orthogroups_2024-Update
At3g47400 No alias Probable pectinesterase/pectinesterase inhibitor 33... 0.03 Orthogroups_2024-Update
At3g59010 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V613] 0.02 Orthogroups_2024-Update
At4g02320 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V0A5] 0.03 Orthogroups_2024-Update
At4g33230 No alias Putative pectinesterase/pectinesterase inhibitor 45... 0.02 Orthogroups_2024-Update
At5g27870 No alias Putative pectinesterase/pectinesterase inhibitor 28... 0.02 Orthogroups_2024-Update
Bradi2g52140 No alias methylesterase PCR A 0.04 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Brara.E00332.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Brara.F01763.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.F02072.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.H01111.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.K01158.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
GRMZM2G025182 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
Glyma.01G138000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
Glyma.01G138100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.04G236200 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
Glyma.06G319100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.07G024200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.07G024300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.09G042100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.09G042200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.09G076100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.12G004400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.13G115200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.15G183700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.17G028600 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Glyma.20G237800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
HORVU3Hr1G077630.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.05 Orthogroups_2024-Update
LOC_Os02g18650 No alias pectinesterase, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g38560 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435891g0010 No alias (o04887|pme2_citsi : 389.0) Pectinesterase-2 precursor... 0.02 Orthogroups_2024-Update
MA_130858g0010 No alias (at5g53370 : 416.0) pectin methylesterase PCR fragment F... 0.01 Orthogroups_2024-Update
MA_2017g0010 No alias (at5g53370 : 505.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
MA_354248g0010 No alias (at3g49220 : 511.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_9367g0020 No alias (o04886|pme1_citsi : 511.0) Pectinesterase-1 precursor... 0.04 Orthogroups_2024-Update
PSME_00022513-RA No alias (p83948|pme3_citsi : 479.0) Pectinesterase-3 precursor... 0.04 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.01 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.001G162500 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.002G202500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Potri.003G021300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.005G022900 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Potri.006G134700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.010G109400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.02 Orthogroups_2024-Update
Potri.013G013400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Potri.015G127700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Potri.T030500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Pp1s258_34V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.03 Orthogroups_2024-Update
Pp1s32_31V6 No alias putative pectin esterase [Oryza sativa (japonica cultivar-group)] 0.06 Orthogroups_2024-Update
Pp1s378_15V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.03 Orthogroups_2024-Update
Seita.2G441400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Seita.3G376400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G022500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G344400.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Seita.5G450500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.6G168500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Seita.7G123200.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Sobic.010G071300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc03g083840 No alias Pectinesterase (AHRD V3.3 *** K4BIF9_SOLLC) 0.02 Orthogroups_2024-Update
Solyc05g047590 No alias Sl Pectinesterase 0.01 Orthogroups_2024-Update
Sopen02g024940 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen03g023110 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen03g023630 No alias Pectinesterase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 32 180
IPR000070 Pectinesterase_cat 256 551
No external refs found!