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  5. PSME_00056058-RA

PSME_00056058-RA


Description : (at5g59720 : 151.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27396|hsp11_dauca : 149.0) 17.8 kDa class I heat shock protein (Clone DCHSP17.7) - Daucus carota (Carrot) & (reliability: 302.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056058-RA
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_06519 No alias 17.4 kda class iii heat shock protein 0.02 Orthogroups_2024-Update
A4A49_23634 No alias 18.1 kda class i heat shock protein 0.03 Orthogroups_2024-Update
At5g12030 No alias 17.7 kDa class II heat shock protein... 0.03 Orthogroups_2024-Update
PSME_00012475-RA No alias (p19243|hsp11_pea : 160.0) 18.1 kDa class I heat shock... 0.06 Orthogroups_2024-Update
PSME_00021206-RA No alias (p19242|hsp21_pea : 115.0) 17.1 kDa class II heat shock... 0.05 Orthogroups_2024-Update
PSME_00024444-RA No alias (at1g54050 : 112.0) HSP20-like chaperones superfamily... 0.02 Orthogroups_2024-Update
PSME_00036170-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00036171-RA No alias (p46516|hsp21_helan : 132.0) 17.9 kDa class II heat... 0.04 Orthogroups_2024-Update
PSME_00051332-RA No alias (p24631|hsp21_maize : 114.0) 17.5 kDa class II heat... 0.01 Orthogroups_2024-Update
PSME_00055967-RA No alias (p19242|hsp21_pea : 100.0) 17.1 kDa class II heat shock... 0.04 Orthogroups_2024-Update
Potri.001G238700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G082000.1 No alias class-C-I small heat-shock-responsive protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 56 159
No external refs found!