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  5. PSME_00056082-RA

PSME_00056082-RA


Description : (at5g24230 : 245.0) Lipase class 3-related protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Lipase class 3-related protein (TAIR:AT5G24220.1); Has 233 Blast hits to 232 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 10; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)


Gene families : OG_42_0000443 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056082-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
403289 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os01g47610 No alias lipase class 3 family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g34440 No alias lipase class 3 family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10212g0010 No alias (at5g50890 : 385.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
MA_497004g0010 No alias (at4g10955 : 217.0) alpha/beta-Hydrolases superfamily... 0.05 Orthogroups_2024-Update
PSME_00032183-RA No alias (at4g10955 : 248.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
Sobic.003G297200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 91 169
No external refs found!