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  5. PSME_00056194-RA

PSME_00056194-RA


Description : (at5g64950 : 106.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056194-RA

Target Alias Description ECC score Gene Family Method Actions
At1g56380 No alias Mitochondrial transcription termination factor family... 0.02 Orthogroups_2024-Update
At1g62010 No alias F8K4.20 protein [Source:UniProtKB/TrEMBL;Acc:O80705] 0.04 Orthogroups_2024-Update
At1g62490 No alias Mitochondrial transcription termination factor family... 0.02 Orthogroups_2024-Update
At5g07900 No alias Mitochondrial transcription termination factor family... 0.02 Orthogroups_2024-Update
Brara.D00047.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I01480.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G107000 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G064880.2 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G067320.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G037550.4 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g27690 No alias expressed protein 0.01 Orthogroups_2024-Update
LOC_Os06g12060 No alias mTERF family protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g24090 No alias mTERF domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os11g10000 No alias mTERF family protein, expressed 0.01 Orthogroups_2024-Update
MA_14049g0010 No alias (at1g62085 : 95.1) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
MA_162625g0010 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
MA_205355g0010 No alias (at5g64950 : 101.0) Mitochondrial transcription... 0.05 Orthogroups_2024-Update
MA_28540g0010 No alias (at5g64950 : 99.4) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
MA_593288g0010 No alias (at1g79220 : 104.0) Mitochondrial transcription... 0.01 Orthogroups_2024-Update
MA_628537g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_760114g0010 No alias (at5g64950 : 80.1) Mitochondrial transcription... 0.01 Orthogroups_2024-Update
PSME_00000445-RA No alias (at5g64950 : 86.7) Mitochondrial transcription... 0.01 Orthogroups_2024-Update
PSME_00038108-RA No alias (at5g64950 : 81.3) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00053051-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G035200 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Potri.001G035300 No alias Mitochondrial transcription termination factor family protein 0.01 Orthogroups_2024-Update
Pp1s219_66V6 No alias No description available 0.04 Orthogroups_2024-Update
Seita.1G321500.1 No alias mTERF-type transcription factor 0.01 Orthogroups_2024-Update
Seita.1G326700.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G095600.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G144900.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G183301.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G133400.1 No alias mTERF-type transcription factor 0.06 Orthogroups_2024-Update
Sobic.010G201900.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g011700 No alias Mitochondrial transcription termination factor family... 0.01 Orthogroups_2024-Update
Sopen04g028710 No alias mTERF 0.04 Orthogroups_2024-Update
Sopen04g028720 No alias mTERF 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 248 358
IPR003690 MTERF 61 185
No external refs found!