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  5. PSME_00056240-RA

PSME_00056240-RA


Description : (at4g00340 : 705.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (p17801|kpro_maize : 365.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1410.0) & (original description: no original description)


Gene families : OG_42_0000166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056240-RA
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
37866 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
55105 No alias S-domain-2 5 0.03 Orthogroups_2024-Update
At4g00340 No alias receptor-like protein kinase 4 [Source:TAIR;Acc:AT4G00340] 0.03 Orthogroups_2024-Update
Bradi2g57410 No alias S-locus lectin protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G002400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
HORVU2Hr1G002830.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
HORVU5Hr1G004160.5 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os04g01320 No alias serine/threonine-protein kinase receptor precursor,... 0.03 Orthogroups_2024-Update
LOC_Os04g28780 No alias serine/threonine-protein kinase receptor precursor,... 0.02 Orthogroups_2024-Update
MA_139996g0010 No alias (at4g27290 : 369.0) S-locus lectin protein kinase family... 0.03 Orthogroups_2024-Update
PSME_00019580-RA No alias (at2g19130 : 610.0) S-locus lectin protein kinase family... 0.03 Orthogroups_2024-Update
Pp1s194_112V6 No alias s-locus lectin protein kinase family protein 0.02 Orthogroups_2024-Update
Seita.2G314200.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.3G040400.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.3G078900.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Seita.7G095800.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Sobic.002G154300.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.002G302500.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
BP GO:0048544 recognition of pollen IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003609 Pan_app 337 397
IPR000858 S_locus_glycoprot_dom 204 315
IPR001480 Bulb-type_lectin_dom 73 166
IPR000719 Prot_kinase_dom 504 768
No external refs found!