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  5. PSME_00056717-RA

PSME_00056717-RA


Description : (at2g45470 : 275.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 550.0) & (original description: no original description)


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056717-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
421629 No alias FASCICLIN-like arabinogalactan 1 0.02 Orthogroups_2024-Update
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
A4A49_05664 No alias fasciclin-like arabinogalactan protein 3 0.03 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.03 Orthogroups_2024-Update
Bradi5g04846 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Orthogroups_2024-Update
Brara.I04200.1 No alias regulatory protein *(DEAP1) of exine formation &... 0.06 Orthogroups_2024-Update
Brara.J01017.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
GRMZM2G144610 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
Glyma.02G308700 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
Glyma.14G004200 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
HORVU4Hr1G082750.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G082970.2 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
MA_10436490g0010 No alias (at2g45470 : 278.0) FASCICLIN-like arabinogalactan... 0.04 Orthogroups_2024-Update
MA_107g0010 No alias (at3g46550 : 239.0) Isolated in a screen for salt... 0.03 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp8g03130.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.01 Orthogroups_2024-Update
Potri.006G174900 No alias Fasciclin-like arabinogalactan family protein 0.02 Orthogroups_2024-Update
Pp1s13_239V6 No alias F4L23.2; fasciclin-like arabinogalactan-protein (FLA8)... 0.03 Orthogroups_2024-Update
Seita.1G153500.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Seita.3G217100.1 No alias regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 Orthogroups_2024-Update
Solyc03g112880 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc07g045440 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen01g037300 No alias Fasciclin domain 0.02 Orthogroups_2024-Update
Sopen08g002270 No alias Fasciclin domain 0.03 Orthogroups_2024-Update
Sopen10g001920 No alias Fasciclin domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 195 324
No external refs found!