Description : (at5g46170 : 320.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 640.0) & (original description: no original description)
Gene families : OG_42_0000982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00056735-RA | |
Cluster | HCCA clusters: Cluster_228 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g21750 | No alias | F-box family protein | 0.02 | Orthogroups_2024-Update | |
Brara.I02836.1 | No alias | substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex | 0.03 | Orthogroups_2024-Update | |
GRMZM2G044512 | No alias | F-box family protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g20500 | No alias | OsFBX82 - F-box domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_40961g0010 | No alias | (at5g46170 : 184.0) F-box family protein; CONTAINS... | 0.03 | Orthogroups_2024-Update | |
Seita.5G332700.1 | No alias | substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Predicted GO |
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004358 | glutamate N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0006887 | exocytosis | IEP | Predicted GO |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
CC | GO:0017119 | Golgi transport complex | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
BP | GO:0046903 | secretion | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
CC | GO:0099023 | tethering complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 26 | 60 |
No external refs found! |