Description : (at1g02040 : 87.8) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)
Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00056793-RA | |
Cluster | HCCA clusters: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_01661 | No alias | zinc finger protein zat10 | 0.03 | Orthogroups_2024-Update | |
A4A49_29565 | No alias | zinc finger protein zat5 | 0.03 | Orthogroups_2024-Update | |
A4A49_32244 | No alias | zinc finger protein zat11 | 0.03 | Orthogroups_2024-Update | |
A4A49_40512 | No alias | zinc finger protein zat10 | 0.03 | Orthogroups_2024-Update | |
A4A49_41461 | No alias | zinc finger protein zat10 | 0.03 | Orthogroups_2024-Update | |
At2g26940 | No alias | C2H2-type zinc finger family protein... | 0.03 | Orthogroups_2024-Update | |
Bradi1g14750 | No alias | salt tolerance zinc finger | 0.03 | Orthogroups_2024-Update | |
Bradi4g09410 | No alias | C2H2-type zinc finger family protein | 0.02 | Orthogroups_2024-Update | |
Brara.B00139.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.B01283.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.C01069.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
Brara.E03015.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.F01950.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.J01055.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
GRMZM2G035103 | No alias | salt tolerance zinc finger | 0.02 | Orthogroups_2024-Update | |
GRMZM2G069176 | No alias | salt tolerance zinc finger | 0.03 | Orthogroups_2024-Update | |
GRMZM2G361210 | No alias | C2H2-type zinc finger family protein | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G097500.3 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G112930.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G113090.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G113100.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g62130 | No alias | ZOS1-14 - C2H2 zinc finger protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g66570 | No alias | ZOS1-19 - C2H2 zinc finger protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g19180 | No alias | ZOS2-06 - C2H2 zinc finger protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g38600 | No alias | ZOS5-09 - C2H2 zinc finger protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g39970 | No alias | ZOS7-08 - C2H2 zinc finger protein, expressed | 0.04 | Orthogroups_2024-Update | |
MA_101494g0010 | No alias | (at1g02040 : 99.8) C2H2-type zinc finger family protein;... | 0.03 | Orthogroups_2024-Update | |
MA_109421g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
MA_19127g0010 | No alias | (at1g02040 : 100.0) C2H2-type zinc finger family... | 0.03 | Orthogroups_2024-Update | |
MA_602g0010 | No alias | (at5g56200 : 91.3) C2H2 type zinc finger transcription... | 0.04 | Orthogroups_2024-Update | |
MA_858691g0010 | No alias | (at1g02040 : 88.2) C2H2-type zinc finger family protein;... | 0.04 | Orthogroups_2024-Update | |
MA_9316262g0010 | No alias | (at2g45120 : 86.3) C2H2-like zinc finger protein;... | 0.08 | Orthogroups_2024-Update | |
PSME_00015139-RA | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
Potri.001G224600 | No alias | C2H2 type zinc finger transcription factor family | 0.03 | Orthogroups_2024-Update | |
Potri.001G235800 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | Orthogroups_2024-Update | |
Potri.002G119300 | No alias | salt tolerance zinc finger | 0.04 | Orthogroups_2024-Update | |
Potri.002G143600 | No alias | C2H2-type zinc finger family protein | 0.03 | Orthogroups_2024-Update | |
Potri.009G089400 | No alias | salt tolerance zinc finger | 0.04 | Orthogroups_2024-Update | |
Potri.009G166200 | No alias | C2H2-like zinc finger protein | 0.03 | Orthogroups_2024-Update | |
Potri.010G209400 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.010G229400 | No alias | C2H2-type zinc finger family protein | 0.02 | Orthogroups_2024-Update | |
Potri.014G017300 | No alias | salt tolerance zinc finger | 0.06 | Orthogroups_2024-Update | |
Pp1s162_50V6 | No alias | cys2 his2 zinc-finger transcription factor | 0.03 | Orthogroups_2024-Update | |
Pp1s286_28V6 | No alias | cys2 his2 zinc-finger transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.2G373600.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.3G062700.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.5G374800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G248000.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.9G357400.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.9G357600.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.04 | Orthogroups_2024-Update | |
Seita.9G361000.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.04 | Orthogroups_2024-Update | |
Seita.9G449600.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.04 | Orthogroups_2024-Update | |
Sobic.001G035100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.001G330200.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.001G333700.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.05 | Orthogroups_2024-Update | |
Sobic.005G025100.1 | No alias | C2H2-type subclass ZAT transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.009G164600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc03g115450 | No alias | LOW QUALITY:Zinc finger protein 1 (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Solyc05g054650 | No alias | Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) | 0.03 | Orthogroups_2024-Update | |
Solyc05g054660 | No alias | Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) | 0.02 | Orthogroups_2024-Update | |
Solyc06g060480 | No alias | Zinc finger family protein (AHRD V3.3 *** B9HPY6_POPTR) | 0.03 | Orthogroups_2024-Update | |
Solyc11g073060 | No alias | Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) | 0.02 | Orthogroups_2024-Update | |
Solyc12g088400 | No alias | Zinc-finger protein (AHRD V3.3 *-* Q40899_PETHY) | 0.03 | Orthogroups_2024-Update | |
Sopen05g033130 | No alias | C2H2-type zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen06g031240 | No alias | C2H2-type zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen12g030370 | No alias | C2H2-type zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |