PSME_00056872-RA


Description : (at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 220.0) & (original description: no original description)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056872-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_33562 No alias dof zinc finger protein dof4.6 0.06 Orthogroups_2024-Update
At3g50410 No alias OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5] 0.03 Orthogroups_2024-Update
At4g21080 No alias Dof zinc finger protein DOF4.5... 0.02 Orthogroups_2024-Update
At4g38000 No alias DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8] 0.02 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
Bradi3g29940 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi5g18640 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.C02339.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.H01965.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.04 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.11G151497 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU3Hr1G072970.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU3Hr1G116220.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU5Hr1G021290.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
LOC_Os01g17000 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g47810 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
MA_83624g0010 No alias (at5g60200 : 114.0) Encodes a Dof-type transcription... 0.04 Orthogroups_2024-Update
Potri.004G038800 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.004G056900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Potri.015G009300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s118_226V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Pp1s199_87V6 No alias cycling dof factor 2 0.02 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.4G124800.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g065290 No alias Dof zinc finger protein2 0.04 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g075370 No alias Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA) 0.02 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.03 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g022580 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g032010 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g031790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen09g005390 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 35 91
No external refs found!