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  5. PSME_00056873-RA

PSME_00056873-RA


Description : (at2g30020 : 299.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00056873-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_30385 No alias putative protein phosphatase 2c 25 0.03 Orthogroups_2024-Update
A4A49_39253 No alias putative protein phosphatase 2c 25 0.06 Orthogroups_2024-Update
AC208201.3_FG002 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
MA_10430806g0010 No alias (at2g30020 : 142.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
MA_1114215g0010 No alias (at2g30020 : 207.0) Encodes AP2C1. Belongs to the clade... 0.02 Orthogroups_2024-Update
PSME_00033474-RA No alias (at2g30020 : 310.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
Sobic.001G406300.1 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
Sobic.005G087800.1 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
Solyc06g007190 No alias Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU) 0.02 Orthogroups_2024-Update
Sopen05g031070 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update
Sopen06g033470 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 67 316
No external refs found!