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  5. PSME_00057231-RA

PSME_00057231-RA


Description : (at2g37950 : 89.4) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 598 Blast hits to 594 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 4; Plants - 538; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)


Gene families : OG_42_0000872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00057231-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G159600 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G227900 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
MA_88112g0010 No alias (at5g01070 : 99.4) RING/FYVE/PHD zinc finger superfamily... 0.04 Orthogroups_2024-Update
Potri.004G059200 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 126 168
No external refs found!