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  5. Sopen06g018880

Sopen06g018880


Description : SNARE domain


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g018880
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
130326 No alias syntaxin of plants 124 0.09 Orthogroups_2024-Update
A4A49_06568 No alias syntaxin-related protein knolle 0.1 Orthogroups_2024-Update
A4A49_20578 No alias syntaxin-112 0.02 Orthogroups_2024-Update
At1g08560 No alias SYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8] 0.07 Orthogroups_2024-Update
At1g61290 No alias Syntaxin-124 [Source:UniProtKB/Swiss-Prot;Acc:O64791] 0.03 Orthogroups_2024-Update
Brara.E03504.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Brara.F00536.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.21 Orthogroups_2024-Update
Brara.H02867.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.17 Orthogroups_2024-Update
Cre13.g588550 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
Glyma.02G069700 No alias syntaxin of plants 111 0.08 Orthogroups_2024-Update
Glyma.16G151200 No alias syntaxin of plants 111 0.1 Orthogroups_2024-Update
LOC_Os03g52650 No alias syntaxin-related protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g57310 No alias syntaxin, putative, expressed 0.02 Orthogroups_2024-Update
Potri.009G117900 No alias syntaxin of plants 112 0.02 Orthogroups_2024-Update
Potri.019G030800 No alias syntaxin of plants 111 0.07 Orthogroups_2024-Update
Solyc01g109750 No alias Syntaxin, putative (AHRD V3.3 *** B9RH57_RICCO) 0.07 Orthogroups_2024-Update
Solyc06g053760 No alias Syntaxin, putative (AHRD V3.3 *** B9SHK3_RICCO) 0.27 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 251 301
IPR006011 Syntaxin_N 40 248
No external refs found!