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  5. Bradi1g00620

Bradi1g00620


Description : ubiquitin-conjugating enzyme 5


Gene families : OG_42_0001511 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g00620
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G150867 No alias ubiquitin-conjugating enzyme 5 0.04 Orthogroups_2024-Update
LOC_Os10g31000 No alias ubiquitin-conjugating enzyme, putative, expressed 0.03 Orthogroups_2024-Update
Seita.9G236200.1 No alias E2 ubiquitin-conjugating enzyme *(UBC4) &... 0.02 Orthogroups_2024-Update
Sobic.001G503500.1 No alias E2 ubiquitin-conjugating enzyme *(UBC4) &... 0.03 Orthogroups_2024-Update
evm.model.contig_569.3 No alias (p16577|ubc4_wheat : 238.0) Ubiquitin-conjugating enzyme... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 142
No external refs found!