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  5. Bradi1g00900

Bradi1g00900


Description : Putative lysine decarboxylase family protein


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g00900
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At3g53450 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
At5g11950 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update
GRMZM5G879665 No alias lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
Glyma.09G229100 No alias Putative lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
Glyma.17G257200 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Glyma.19G198400 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Potri.005G248900 No alias Putative lysine decarboxylase family protein 0.05 Orthogroups_2024-Update
Solyc04g081290 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 91 220
No external refs found!