1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi1g02030

Bradi1g02030


Description : Translation elongation factor EF1B/ribosomal protein S6 family protein


Gene families : OG_42_0007385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g02030
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
58368 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 Orthogroups_2024-Update
A4A49_03704 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.05 Orthogroups_2024-Update
A4A49_12743 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.07 Orthogroups_2024-Update
Brara.I01293.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.12 Orthogroups_2024-Update
Brara.I01316.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre12.g520600 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.08 Orthogroups_2024-Update
GRMZM2G118005 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.06 Orthogroups_2024-Update
Glyma.05G218800 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 Orthogroups_2024-Update
HORVU5Hr1G120250.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.15 Orthogroups_2024-Update
Kfl00077_0230 kfl00077_0230_v1.1 (p82403|rr6_spiol : 125.0) 30S ribosomal protein S6... 0.1 Orthogroups_2024-Update
Potri.001G088300 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.07 Orthogroups_2024-Update
Pp1s24_129V6 No alias ribosomal protein s6 0.03 Orthogroups_2024-Update
Pp1s359_29V6 No alias ribosomal protein s6 0.02 Orthogroups_2024-Update
Seita.9G016600.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Sobic.001G017000.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Solyc08g082690 No alias Ribosomal protein S6 (AHRD V3.3 *** A0A103XFW4_CYNCS) 0.1 Orthogroups_2024-Update
Sopen08g030910 No alias Ribosomal protein S6 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 104 203
No external refs found!