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  5. Bradi1g02550

Bradi1g02550


Description : photosystem II reaction center PSB28 protein


Gene families : OG_42_0005420 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g02550
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_35428 No alias photosystem ii reaction center psb28 protein, chloroplastic 0.02 Orthogroups_2024-Update
At4g28660 No alias Photosystem II reaction center Psb28 protein... 0.03 Orthogroups_2024-Update
GRMZM2G005433 No alias photosystem II reaction center PSB28 protein 0.02 Orthogroups_2024-Update
GRMZM2G132506 No alias photosystem II reaction center PSB28 protein 0.04 Orthogroups_2024-Update
Glyma.10G040600 No alias photosystem II reaction center PSB28 protein 0.03 Orthogroups_2024-Update
Glyma.13G127200 No alias photosystem II reaction center PSB28 protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G086190.2 No alias protein involved in PS-II assembly *(Psb28) 0.03 Orthogroups_2024-Update
MA_18349g0010 No alias (at4g28660 : 201.0) Similar to PsbW subunit of... 0.04 Orthogroups_2024-Update
Pp1s311_70V6 No alias photosystem ii 13kd chloroplast precursor 0.03 Orthogroups_2024-Update
Sopen09g025650 No alias Psb28 protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005610 PSII_Psb28_class-1 71 176
No external refs found!