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  5. Bradi1g02940

Bradi1g02940


Description : calreticulin 1a


Gene families : OG_42_0001219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g02940
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
144212 No alias calreticulin 1a 0.04 Orthogroups_2024-Update
A4A49_07077 No alias calreticulin 0.03 Orthogroups_2024-Update
At1g09210 No alias Calreticulin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q38858] 0.05 Orthogroups_2024-Update
At1g56340 No alias Calreticulin-1 [Source:UniProtKB/Swiss-Prot;Acc:O04151] 0.04 Orthogroups_2024-Update
Brara.A02267.1 No alias ER luminal lectin chaperone *(CRT) 0.07 Orthogroups_2024-Update
Brara.I01691.1 No alias ER luminal lectin chaperone *(CRT) 0.1 Orthogroups_2024-Update
Cre01.g038400 No alias calreticulin 1b 0.05 Orthogroups_2024-Update
GRMZM2G074687 No alias calreticulin 1a 0.05 Orthogroups_2024-Update
GRMZM2G358059 No alias calreticulin 1a 0.09 Orthogroups_2024-Update
Glyma.10G147600 No alias calreticulin 1b 0.08 Orthogroups_2024-Update
Glyma.11G126100 No alias calreticulin 3 0.03 Orthogroups_2024-Update
Glyma.12G050700 No alias calreticulin 3 0.03 Orthogroups_2024-Update
Glyma.20G098400 No alias calreticulin 1b 0.09 Orthogroups_2024-Update
Kfl00090_0160 kfl00090_0160_v1.1 (at1g56340 : 471.0) Encodes one of three Arabidopsis... 0.05 Orthogroups_2024-Update
Potri.013G009500 No alias calreticulin 1b 0.02 Orthogroups_2024-Update
Seita.J030900.1 No alias ER luminal lectin chaperone *(CRT) 0.13 Orthogroups_2024-Update
Sobic.001G025500.1 No alias ER luminal lectin chaperone *(CRT) 0.02 Orthogroups_2024-Update
Sobic.002G090500.1 No alias ER luminal lectin chaperone *(CRT) 0.07 Orthogroups_2024-Update
Sobic.009G190500.1 No alias ER luminal lectin chaperone *(CRT) & component *(CRT3)... 0.04 Orthogroups_2024-Update
Solyc01g100380 No alias Calreticulin (AHRD V3.3 *** CALR_NICPL) 0.08 Orthogroups_2024-Update
Sopen01g043900 No alias Calreticulin family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0005783 endoplasmic reticulum IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001580 Calret/calnex 28 263
IPR001580 Calret/calnex 265 338
No external refs found!