1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi1g07090

Bradi1g07090


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0009240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g07090
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Brara.I04605.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00038334-RA No alias (at2g22070 : 468.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Solyc04g054290 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 479 525
IPR002885 Pentatricopeptide_repeat 377 424
IPR032867 DYW_dom 653 776
IPR002885 Pentatricopeptide_repeat 214 241
IPR002885 Pentatricopeptide_repeat 553 578
IPR002885 Pentatricopeptide_repeat 112 142
IPR002885 Pentatricopeptide_repeat 81 109
IPR002885 Pentatricopeptide_repeat 318 338
IPR002885 Pentatricopeptide_repeat 185 211
IPR002885 Pentatricopeptide_repeat 244 271
No external refs found!