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  5. Bradi1g08060

Bradi1g08060


Description : Cyclic nucleotide-regulated ion channel family protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g08060
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Bradi2g20660 No alias cyclic nucleotide-gated cation channel 4 0.04 Orthogroups_2024-Update
HORVU6Hr1G058880.14 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.05 Orthogroups_2024-Update
Seita.9G085500.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 134 460
IPR000595 cNMP-bd_dom 562 651
No external refs found!