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  5. Bradi1g08340

Bradi1g08340


Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g08340
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
A4A49_14436 No alias agamous-like mads-box protein agl11 0.02 Orthogroups_2024-Update
A4A49_16643 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_18078 No alias developmental protein sepallata 1 0.05 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.02 Orthogroups_2024-Update
At1g26310 No alias Transcription factor CAULIFLOWER... 0.02 Orthogroups_2024-Update
At2g45660 No alias SOC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL4] 0.03 Orthogroups_2024-Update
At4g09960 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
At4g11880 No alias Agamous-like MADS-box protein AGL14... 0.02 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.08 Orthogroups_2024-Update
Brara.G01817.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.04 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Glyma.07G081300 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Glyma.08G105500 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G054390.1 No alias MADS/AGL-type transcription factor 0.06 Orthogroups_2024-Update
HORVU7Hr1G081070.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
MA_17919g0010 No alias (q6eu39|mads6_orysa : 111.0) MADS-box transcription... 0.03 Orthogroups_2024-Update
PSME_00042195-RA No alias (at2g45660 : 177.0) Controls flowering and is required... 0.03 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.02 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Seita.3G073000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G236800.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.05 Orthogroups_2024-Update
Solyc06g059970 No alias TPI 0.02 Orthogroups_2024-Update
Solyc12g056460 No alias MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 84 172
No external refs found!