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  5. Bradi1g12540

Bradi1g12540


Description : ankyrin repeat family protein


Gene families : OG_42_0000377 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g12540
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g07640 No alias ankyrin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g29190 No alias ankyrin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g03750 No alias ankyrin, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G378400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G378800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 443 474
IPR020683 Ankyrin_rpt-contain_dom 243 315
IPR020683 Ankyrin_rpt-contain_dom 90 183
IPR002110 Ankyrin_rpt 189 214
No external refs found!