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  5. Bradi1g12860

Bradi1g12860


Description : zinc transporter 10 precursor


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g12860
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
92505 No alias iron regulated transporter 3 0.02 Orthogroups_2024-Update
A4A49_32895 No alias zinc transporter 5 0.02 Orthogroups_2024-Update
LOC_Os05g39540 No alias metal cation transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g12890 No alias metal cation transporter, putative, expressed 0.05 Orthogroups_2024-Update
Mp1g19040.1 No alias metal cation transporter (ZIP) 0.02 Orthogroups_2024-Update
Potri.012G119100 No alias zinc transporter 10 precursor 0.02 Orthogroups_2024-Update
Sobic.009G170500.1 No alias metal cation transporter *(ZIP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 49 364
No external refs found!