1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi1g14550

Bradi1g14550


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g14550
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Bradi4g03000 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G012170.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G106970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g42230 No alias B3 DNA binding domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os03g42370 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g42430 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g40080 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.001G165000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G149100.1 No alias REM-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 442 524
IPR003340 B3_DNA-bd 238 330
IPR003340 B3_DNA-bd 27 110
No external refs found!