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  5. Bradi1g14850

Bradi1g14850


Description : Protein of unknown function (DUF620)


Gene families : OG_42_0002142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g14850
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Brara.K01025.1 No alias GTPase effector *(BDR) 0.02 Orthogroups_2024-Update
Glyma.10G259500 No alias Protein of unknown function (DUF620) 0.03 Orthogroups_2024-Update
HORVU4Hr1G013190.9 No alias GTPase effector *(BDR) 0.06 Orthogroups_2024-Update
MA_104694g0010 No alias (at3g19540 : 575.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00015895-RA No alias (at3g19540 : 568.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
PSME_00039109-RA No alias (at3g19540 : 416.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
Seita.3G367100.1 No alias GTPase effector *(BDR) 0.04 Orthogroups_2024-Update
Sobic.008G143600.1 No alias GTPase effector *(BDR) 0.03 Orthogroups_2024-Update
Sopen01g049590 No alias Protein of unknown function (DUF620) 0.02 Orthogroups_2024-Update
Sopen04g031810 No alias Protein of unknown function (DUF620) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006873 DUF620 169 411
No external refs found!