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  5. Bradi1g15623

Bradi1g15623


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG_42_0000590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g15623
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Brara.E01238.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
Brara.G01016.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
GRMZM2G400439 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
HORVU3Hr1G005320.2 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!