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Bradi1g15940


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0004410 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g15940
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Brara.H00271.1 No alias spindle assembly checkpoint protein *(BUB3) 0.03 Orthogroups_2024-Update
Glyma.20G132800 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 25 51
IPR001680 WD40_repeat 100 132
IPR001680 WD40_repeat 234 275
IPR001680 WD40_repeat 62 88
No external refs found!