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  5. Bradi1g16060

Bradi1g16060


Description : Argonaute family protein


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g16060
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Brara.F03787.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
Glyma.02G002500 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Glyma.15G126700 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
LOC_Os01g16870 No alias argonaute, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40280 No alias piwi domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40320 No alias PINHEAD, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g52550 No alias PAZ domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048580 regulation of post-embryonic development IEP Predicted GO
BP GO:0048582 positive regulation of post-embryonic development IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0051094 positive regulation of developmental process IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
BP GO:0051240 positive regulation of multicellular organismal process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
BP GO:2000038 regulation of stomatal complex development IEP Predicted GO
BP GO:2000123 positive regulation of stomatal complex development IEP Predicted GO
InterPro domains Description Start Stop
IPR003165 Piwi 694 997
IPR032472 ArgoL2 540 587
IPR014811 ArgoL1 347 395
IPR003100 PAZ_dom 409 530
IPR032474 Argonaute_N 193 336
No external refs found!