Bradi1g16660


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g16660
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_33732 No alias pyruvate decarboxylase 2 0.03 Orthogroups_2024-Update
LOC_Os05g39320 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.03 Orthogroups_2024-Update
LOC_Os07g49250 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.03 Orthogroups_2024-Update
PSME_00022292-RA No alias (at4g33070 : 389.0) Thiamine pyrophosphate dependent... 0.02 Orthogroups_2024-Update
PSME_00036376-RA No alias (at4g33070 : 347.0) Thiamine pyrophosphate dependent... 0.03 Orthogroups_2024-Update
Seita.9G439800.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0030976 thiamine pyrophosphate binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR011766 TPP_enzyme-bd_C 439 563
IPR012000 Thiamin_PyroP_enz_cen_dom 244 345
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 47 215
No external refs found!