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  5. Bradi1g17940

Bradi1g17940


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g17940
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
At3g59010 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V613] 0.02 Orthogroups_2024-Update
Brara.E00487.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.01 Orthogroups_2024-Update
Glyma.03G029100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
LOC_Os03g18860 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.02 Orthogroups_2024-Update
Solyc02g080220 No alias Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 56 230
IPR000070 Pectinesterase_cat 273 572
No external refs found!