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  5. Bradi1g17961

Bradi1g17961


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g17961
Cluster HCCA clusters: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
At2g22200 No alias Ethylene-responsive transcription factor ERF056... 0.02 Orthogroups_2024-Update
At3g57600 No alias Dehydration-responsive element-binding protein 2F... 0.02 Orthogroups_2024-Update
At4g25470 No alias C-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9] 0.02 Orthogroups_2024-Update
At5g61890 No alias Ethylene-responsive transcription factor ERF114... 0.03 Orthogroups_2024-Update
Brara.F00821.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.H02647.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Glyma.03G162700 No alias ethylene-responsive element binding factor 15 0.03 Orthogroups_2024-Update
Glyma.08G320700 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Glyma.10G007000 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Glyma.10G036700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G168500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g15660 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g09810 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g44960 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00039617-RA No alias (at4g17500 : 120.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
Potri.003G220200 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.006G069400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.01 Orthogroups_2024-Update
Pp1s136_219V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s138_190V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s90_184V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G278500.1 No alias transcription factor *(ABI4) & subgroup ERF-IV/DREB2... 0.04 Orthogroups_2024-Update
Seita.5G141600.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.7G290600.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.02 Orthogroups_2024-Update
Solyc08g081960 No alias Solanum Lycopersicum Cytokinin Response Factor 2 0.02 Orthogroups_2024-Update
Solyc09g089910 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 71 120
No external refs found!