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Bradi1g19380


Description : rhomboid protein-related


Gene families : OG_42_0003310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g19380
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Pp1s276_67V6 No alias transmembrane protein 115 0.02 Orthogroups_2024-Update
Seita.2G414700.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
evm.model.tig00020554.99 No alias (at3g07950 : 169.0) rhomboid protein-related; FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR013861 DUF1751_Mem_euk 55 153
No external refs found!