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  5. Bradi1g22030

Bradi1g22030


Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g22030
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08130 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Bradi1g59880 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Brara.B00610.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Brara.C04215.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
GRMZM2G109326 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.04G006100 No alias COBRA-like protein 2 precursor 0.02 Orthogroups_2024-Update
PSME_00041222-RA No alias (q60e70|cobl3_orysa : 636.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Potri.015G060100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Pp1s44_119V6 No alias protein cobra 0.02 Orthogroups_2024-Update
Pp1s84_123V6 No alias protein cobra 0.02 Orthogroups_2024-Update
Sobic.001G336700.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Sopen03g033970 No alias COBRA-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 47 210
No external refs found!