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  5. Bradi1g22500

Bradi1g22500


Description : NB-ARC domain-containing disease resistance protein


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g22500
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Bradi2g03588 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi2g39067 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Bradi2g39537 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G022730.24 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G111700.6 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g07774 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g31800 No alias RGH1A, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g28460 No alias expressed protein 0.03 Orthogroups_2024-Update
Seita.8G182600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 185 438
No external refs found!