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  5. Sopen06g022000

Sopen06g022000


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g022000
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
A4A49_12312 No alias dof zinc finger protein dof2.1 0.05 Orthogroups_2024-Update
A4A49_23576 No alias dof zinc finger protein dof5.4 0.03 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.02 Orthogroups_2024-Update
A4A49_35213 No alias dof zinc finger protein dof1.7 0.05 Orthogroups_2024-Update
At5g65590 No alias SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2] 0.02 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi3g56380 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Brara.E01618.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.05G037800 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU4Hr1G013890.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Potri.014G036600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Seita.3G327800.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.001G252800.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G489900.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.002G236600.2 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.006G267900.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g077950 No alias Dof zinc finger protein5 0.04 Orthogroups_2024-Update
Solyc08g082910 No alias Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 19 75
No external refs found!