Bradi1g26030

Description : glutamate receptor 3.4

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g26030
Cluster	HCCA clusters: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
92810	No alias	glutamate receptor 3.3	0.01	Orthogroups_2024-Update
A4A49_16225	No alias	glutamate receptor 3.6	0.05	Orthogroups_2024-Update
A4A49_28968	No alias	glutamate receptor 2.8	0.04	Orthogroups_2024-Update
Bradi1g46910	No alias	glutamate receptor 2.5	0.03	Orthogroups_2024-Update
Bradi4g30850	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Bradi4g30880	No alias	glutamate receptor 2.7	0.04	Orthogroups_2024-Update
Glyma.06G305000	No alias	glutamate receptor 3.4	0.02	Orthogroups_2024-Update
HORVU2Hr1G064530.8	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
HORVU5Hr1G063480.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
HORVU7Hr1G031700.13	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
MA_10140272g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10434458g0010	No alias	(q7xp59\|glr31_orysa : 638.0) Glutamate receptor 3.1...	0.02	Orthogroups_2024-Update
PSME_00001098-RA	No alias	(at2g29120 : 637.0) member of Putative ligand-gated ion...	0.04	Orthogroups_2024-Update
PSME_00001292-RA	No alias	(at4g35290 : 567.0) Encodes a putative glutamate...	0.02	Orthogroups_2024-Update
PSME_00009649-RA	No alias	(at4g35290 : 475.0) Encodes a putative glutamate...	0.02	Orthogroups_2024-Update
PSME_00023170-RA	No alias	(at1g42540 : 830.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00027644-RA	No alias	(at2g29120 : 490.0) member of Putative ligand-gated ion...	0.01	Orthogroups_2024-Update
PSME_00050642-RA	No alias	(q7xp59\|glr31_orysa : 567.0) Glutamate receptor 3.1...	0.02	Orthogroups_2024-Update
Seita.1G009400.1	No alias	ligand-gated cation channel *(GLR)	0.01	Orthogroups_2024-Update
Seita.1G345900.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Seita.2G212900.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Seita.2G335400.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Seita.4G260900.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sobic.002G208500.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Sobic.002G208700.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sobic.002G209100.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Sobic.010G068600.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Sobic.010G231100.2	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
evm.model.contig_3514.1	No alias	(at4g35290 : 111.0) Encodes a putative glutamate...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
BP	GO:0000723	telomere maintenance	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Predicted GO
MF	GO:0004645	phosphorylase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006480	N-terminal protein amino acid methylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0006996	organelle organization	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008184	glycogen phosphorylase activity	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Predicted GO
BP	GO:0032200	telomere organization	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0042255	ribosome assembly	IEP	Predicted GO
BP	GO:0042256	mature ribosome assembly	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0060249	anatomical structure homeostasis	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	481	814
IPR001320	Iontro_rcpt	815	845
IPR001828	ANF_lig-bd_rcpt	53	412

External Links

No external refs found!

Bradi1g26030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation