Sopen06g022200

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0001843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g022200
Cluster	HCCA clusters: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os07g10460	No alias	5-nucleotidase surE, putative, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	462	531
IPR000504	RRM_dom	119	185
IPR000504	RRM_dom	40	102
IPR000504	RRM_dom	388	443
IPR002828	SurE-like_Pase/nucleotidase	608	800

External Links

No external refs found!