Sopen06g022310

Description : Domain of unknown function (DUF3594)

Gene families : OG_42_0000222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000222_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g022310
Cluster	HCCA clusters: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
Brara.E02953.1	No alias	methylation reader Alfin of PRC1 complex	0.03	Orthogroups_2024-Update
Brara.J02651.1	No alias	methylation reader Alfin of PRC1 complex	0.03	Orthogroups_2024-Update
LOC_Os11g14010	No alias	PHD finger protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_10430679g0010	No alias	(at3g11200 : 294.0) AL2 encodes a member of the...	0.02	Orthogroups_2024-Update
Potri.008G069200	No alias	alfin-like 1	0.03	Orthogroups_2024-Update
Sobic.002G083400.1	No alias	methylation reader Alfin of PRC1 complex	0.02	Orthogroups_2024-Update
Sobic.008G073600.2	No alias	methylation reader Alfin of PRC1 complex	0.03	Orthogroups_2024-Update
Solyc05g032770	No alias	PHD finger alfin-like protein (AHRD V3.3 *** A0A072VDQ0_MEDTR)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	203	251
IPR021998	Alfin	14	141

External Links

No external refs found!