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- Bradi1g29120 Solyc07g061920 details </strong></li> </ol> <h1><strong>Bradi1g29120</strong></h1> <br> <p><strong>Description : </strong> AT hook motif DNA-binding family protein</p> <br> <div> <p><strong><abbr title="Click to show help" href="/help/gene_family" data-target="#helpModal">Gene families</abbr> : </strong><a href="/family/view/960057">OG_42_0000248</a> (Orthogroups_2024-Update) Phylogenetic Tree(s): <a href="/tree/view/153945">OG0000248_tree</a> </p> <p><strong>Sequence :</strong> <a href="/sequence/modal/coding/574980" data-target="#profileModal">coding</a> (<a href="/sequence/fasta/coding/574980">download</a>), <a href="/sequence/modal/protein/574980" data-target="#profileModal">protein</a> (<a href="/sequence/fasta/protein/574980">download</a>) </p> </div> <h3 class="banner-blue" id="expression_profile">Expression Profile</h3> <div class="pull-right"> <a href="#" class="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"><i class="fa fa-arrows" aria-hidden="true"></i></a> <a href="#" class="btn btn-default" id="enable_zoom" data-toggle="tooltip" title="Toggle zoom"><i class="fa fa-search" aria-hidden="true"></i></a> </div> <div style="height:550px; max-height:550px; margin-top:30px"> <canvas id="expression-profile" class="center-block" height="550"/> </div> <br> <div class="pull-right"> <a href="/profile/download/plot/372796" class="btn btn-primary" download="plot_372796.txt">Download</a> </div> <p><strong>Note:</strong>Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available <a href="/profile/view/372796">here</a>.</p> <br> <div> <h3 class="banner-blue" id="coexpression_networks">Co-expression Networks</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="coexpression_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><abbr title="Click to show help" href="/help/neighborhood" data-target="#helpModal">Neighborhood</abbr></td> <td>Brachypodium release: <strong>Bradi1g29120</strong></td> <td><a href="/network/download/neighbors/279683" data-toggle="tooltip" data-placement="top" title="Download direct neighbors" download="neighbors_279683.txt"><i class="fa fa-list"></i></span> <a href="/network/graph/279683" data-toggle="tooltip" data-placement="top" title="View neighborhood as graph"><i class="fa fa-sitemap"></i></a> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-area-chart"></i></span> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-table"></i></span></td> </tr> <tr> <td><abbr title="Click to show help" href="/help/cluster" data-target="#helpModal">Cluster</abbr></td> <td>HCCA clusters: <strong><a href="/cluster/view/5084" class="qtip_tooltip" qtip_href="/cluster/tooltip/5084">Cluster_138</a></strong></td> <td><a href="/cluster/view/5084" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/5084" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/5084" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/5084" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <h3 class="banner-blue" id="expression_conservation">Expression Context Conservation (<abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr>)</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="ecc_hits_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Target</th> <th data-sort="string-ins"><span class="sort-icon"></span>Alias</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th data-sort="float"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr> score</th> <th data-sort="string-ins"><span class="sort-icon"></span>Gene Family Method</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><a href="/sequence/view/928010" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/928010">HORVU7Hr1G051150.7</a></td> <td><span class="text-muted">No alias</span></td> <td>Unknown function</td> <td>0.03</td> <td>Orthogroups_2024-Update</td> <td><a href="/ecc/graph_pair/2904014" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/574980/13/42" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2785" data-toggle="tooltip" data-placement="top" title=""The action of a molecule that contributes to the structural integrity of the ribosome." [GOC:mah]">GO:0003735</a></td> <td class="col-xs-6">structural constituent of ribosome</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3423" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine." [EC:2.5.1.6]">GO:0004478</a></td> <td class="col-xs-6">methionine adenosyltransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3441" data-toggle="tooltip" data-placement="top" title=""Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water." [http://www.onelook.com/, ISBN:0198506732]">GO:0004497</a></td> <td class="col-xs-6">monooxygenase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3443" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O." [EC:1.14.13.8]">GO:0004499</a></td> <td class="col-xs-6">N,N-dimethylaniline monooxygenase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3950" data-toggle="tooltip" data-placement="top" title=""Stimulates the exchange of guanyl nucleotides associated with a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase." [GOC:kd, GOC:mah]">GO:0005085</a></td> <td class="col-xs-6">guanyl-nucleotide exchange factor activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3953" data-toggle="tooltip" data-placement="top" title=""Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase." [GOC:mah]">GO:0005088</a></td> <td class="col-xs-6">Ras guanyl-nucleotide exchange factor activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3954" data-toggle="tooltip" data-placement="top" title=""Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase." [GOC:mah]">GO:0005089</a></td> <td class="col-xs-6">Rho guanyl-nucleotide exchange factor activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4050" data-toggle="tooltip" data-placement="top" title=""The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell." [GOC:mah, GOC:vw]">GO:0005198</a></td> <td class="col-xs-6">structural molecule activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4333" data-toggle="tooltip" data-placement="top" title=""The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm." [ISBN:0198506732]">GO:0005622</a></td> <td class="col-xs-6">intracellular</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4531" data-toggle="tooltip" data-placement="top" title=""An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins." [ISBN:0198506732]">GO:0005840</a></td> <td class="col-xs-6">ribosome</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5048" data-toggle="tooltip" data-placement="top" title=""The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome." [GOC:go_curators]">GO:0006412</a></td> <td class="col-xs-6">translation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5138" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another." [CHEBI:16670, GOC:go_curators]">GO:0006518</a></td> <td class="col-xs-6">peptide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5175" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism." [GOC:go_curators, ISBN:0198506732]">GO:0006556</a></td> <td class="col-xs-6">S-adenosylmethionine biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5392" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione." [GOC:ai]">GO:0006790</a></td> <td class="col-xs-6">sulfur compound metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5416" data-toggle="tooltip" data-placement="top" title=""The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:ai]">GO:0006814</a></td> <td class="col-xs-6">sodium ion transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7089" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones." [GOC:curators, ISBN:0198547684]">GO:0009058</a></td> <td class="col-xs-6">biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7090" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." [CHEBI:33694, GOC:mah]">GO:0009059</a></td> <td class="col-xs-6">macromolecule biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10558" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP." [GOC:jl]">GO:0016620</a></td> <td class="col-xs-6">oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10639" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor." [GOC:mah]">GO:0016709</a></td> <td class="col-xs-6">oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10693" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor)." [GOC:jl, ISBN:0198506732]">GO:0016765</a></td> <td class="col-xs-6">transferase activity, transferring alkyl or aryl (other than methyl) groups</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10822" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor." [GOC:ai]">GO:0016903</a></td> <td class="col-xs-6">oxidoreductase activity, acting on the aldehyde or oxo group of donors</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10901" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with any member of the Ras superfamily of monomeric GTPases." [GOC:mah]">GO:0017016</a></td> <td class="col-xs-6">Ras GTPase binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10926" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton." [ISBN:0198547684, PMID:12581856]">GO:0017048</a></td> <td class="col-xs-6">Rho GTPase binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/14777" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a small monomeric GTPase." [GOC:mah]">GO:0031267</a></td> <td class="col-xs-6">small GTPase binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/18043" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells." [CHEBI:33694, GOC:mah]">GO:0034645</a></td> <td class="col-xs-6">cellular macromolecule biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21303" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide." [CHEBI:16670, GOC:dph, GOC:jl]">GO:0043043</a></td> <td class="col-xs-6">peptide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21464" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators]">GO:0043228</a></td> <td class="col-xs-6">non-membrane-bounded organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21468" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators]">GO:0043232</a></td> <td class="col-xs-6">intracellular non-membrane-bounded organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21804" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells." [CHEBI:32988]">GO:0043603</a></td> <td class="col-xs-6">cellular amide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21805" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [CHEBI:32988]">GO:0043604</a></td> <td class="col-xs-6">amide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22423" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells." [GOC:jl]">GO:0044249</a></td> <td class="col-xs-6">cellular biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22437" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds." [GOC:jl, ISBN:0198506732]">GO:0044271</a></td> <td class="col-xs-6">cellular nitrogen compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22438" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione." [GOC:jl]">GO:0044272</a></td> <td class="col-xs-6">sulfur compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/22605" data-toggle="tooltip" data-placement="top" title=""Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures." [GOC:jl]">GO:0044444</a></td> <td class="col-xs-6">cytoplasmic part</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24452" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism." [GOC:go_curators, ISBN:0198506732]">GO:0046500</a></td> <td class="col-xs-6">S-adenosylmethionine metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27734" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a GTPase, any enzyme that catalyzes the hydrolysis of GTP." [GOC:ai]">GO:0051020</a></td> <td class="col-xs-6">GTPase binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40820" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organonitrogen compound." [GOC:pr, GOC:TermGenie]">GO:1901566</a></td> <td class="col-xs-6">organonitrogen compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40830" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon." [GOC:pr, GOC:TermGenie]">GO:1901576</a></td> <td class="col-xs-6">organic substance biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/45954" data-toggle="tooltip" data-placement="top" title=""A macromolecular complex containing both protein and RNA molecules." [GOC:vesicles]">GO:1990904</a></td> <td class="col-xs-6">ribonucleoprotein complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predicted GO</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/4361">IPR005175</a></td> <td class="col-xs-5">PPC_dom</td> <td class="col-xs-2">152</td> <td class="col-xs-2">266</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
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