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  5. Bradi1g29900

Bradi1g29900


Description : FtsH extracellular protease family


Gene families : OG_42_0001288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g29900
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At1g06430 No alias ATP-dependent zinc metalloprotease FTSH 8, chloroplastic... 0.03 Orthogroups_2024-Update
At5g42270 No alias VAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8J6] 0.02 Orthogroups_2024-Update
Brara.H02960.1 No alias protease *(FtsH2/8) & EXECUTER-cleavage protease... 0.02 Orthogroups_2024-Update
Glyma.05G132000 No alias FtsH extracellular protease family 0.03 Orthogroups_2024-Update
Potri.017G084000 No alias FTSH protease 6 0.03 Orthogroups_2024-Update
Sobic.010G223200.1 No alias EXECUTER-cleavage protease *(FtsH2) & protease... 0.03 Orthogroups_2024-Update
Solyc02g081550 No alias LeftsH6FtsH protease 0.02 Orthogroups_2024-Update
Sopen07g026900 No alias Peptidase family M41 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 264 395
IPR000642 Peptidase_M41 477 670
No external refs found!