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  5. Sopen06g022650

Sopen06g022650


Description : Receptor family ligand binding region


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g022650
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
Brara.D01500.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
HORVU2Hr1G064530.8 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
MA_10434458g0010 No alias (q7xp59|glr31_orysa : 638.0) Glutamate receptor 3.1... 0.03 Orthogroups_2024-Update
PSME_00001292-RA No alias (at4g35290 : 567.0) Encodes a putative glutamate... 0.02 Orthogroups_2024-Update
PSME_00045289-RA No alias (at2g17260 : 248.0) Encodes a glutamate receptor.... 0.02 Orthogroups_2024-Update
Potri.011G062750 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 36 386
IPR001638 Solute-binding_3/MltF_N 470 794
IPR001320 Iontro_rcpt 795 825
No external refs found!