- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Zinc finger C-x8-C-x5-C-x3-H type family protein
Gene families : OG_42_0005874 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005874_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g30260 | |
| Cluster | HCCA clusters: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G012041 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.09 | Orthogroups_2024-Update | |
| GRMZM5G889418 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G034600 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.1 | Orthogroups_2024-Update | |
| Kfl00265_0040 | kfl00265_0040_v1.1 | (at1g21580 : 235.0) Zinc finger C-x8-C-x5-C-x3-H type... | 0.03 | Orthogroups_2024-Update | |
| PSME_00034507-RA | No alias | (at1g21580 : 462.0) Zinc finger C-x8-C-x5-C-x3-H type... | 0.04 | Orthogroups_2024-Update | |
| Potri.002G077700 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | Orthogroups_2024-Update | |
| Potri.005G182900 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s30_193V6 | No alias | zinc finger ccch-type containing 3 | 0.07 | Orthogroups_2024-Update | |
| Seita.4G205600.1 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G201500.4 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex | 0.1 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
| BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| MF | GO:0032947 | protein-containing complex scaffold activity | IEP | Predicted GO |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
| BP | GO:0043543 | protein acylation | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |