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  5. Bradi1g30430

Bradi1g30430


Description : vacuolar protein sorting 46.1


Gene families : OG_42_0003479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g30430
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G117935 No alias vacuolar protein sorting 46.1 0.02 Orthogroups_2024-Update
HORVU7Hr1G115800.3 No alias associated protein of ESCRT-III complex *(VPS46/CHMP1) 0.03 Orthogroups_2024-Update
Potri.001G194400 No alias vacuolar protein sorting 46.1 0.02 Orthogroups_2024-Update
Potri.003G045300 No alias vacuolar protein sorting 46.1 0.03 Orthogroups_2024-Update
Sopen03g040170 No alias Snf7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 175
No external refs found!