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  5. Bradi1g31072

Bradi1g31072


Description : Low temperature and salt responsive protein family


Gene families : OG_42_0000502 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g31072
Cluster HCCA clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
At1g57550 No alias UPF0057 membrane protein At1g57550... 0.03 Orthogroups_2024-Update
Glyma.02G205102 No alias Low temperature and salt responsive protein family 0.02 Orthogroups_2024-Update
HORVU6Hr1G024460.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp4g20350.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Solyc01g102290 No alias protein RARE-COLD-INDUCIBLE 2B-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000612 PMP3 10 57
No external refs found!