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Description : RING-H2 finger A3A
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g32080 | |
| Cluster | HCCA clusters: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.02 | Orthogroups_2024-Update | |
| At3g19140 | No alias | Putative RING-H2 finger protein ATL62... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g56160 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.A02911.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E02303.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G02364.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.15G173800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G239400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G010400 | No alias | hypoxia-responsive family protein / zinc finger... | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G021450.9 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G059020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G069670.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G036380.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g11500 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g47700 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_227897g0010 | No alias | (at3g16720 : 112.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| MA_44828g0020 | No alias | (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... | 0.02 | Orthogroups_2024-Update | |
| MA_5319g0010 | No alias | (at1g49230 : 120.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_8693914g0010 | No alias | (at5g05280 : 130.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_98187g0010 | No alias | (at1g72200 : 119.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003016-RA | No alias | (at1g72200 : 114.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00054098-RA | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| Potri.017G049300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.7G110600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Seita.9G063000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G279000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.01 | Orthogroups_2024-Update | |
| Sobic.004G348500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G231400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g066430 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen11g001320 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
| BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| CC | GO:0009539 | photosystem II reaction center | IEP | Predicted GO |
| MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
| BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
| BP | GO:0032502 | developmental process | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
| BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 126 | 169 |
| No external refs found! |