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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0011867 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g34572 | |
| Cluster | HCCA clusters: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sobic.010G256000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 435 | 482 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 248 |
| IPR002885 | Pentatricopeptide_repeat | 334 | 381 |
| IPR002885 | Pentatricopeptide_repeat | 172 | 195 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 434 |
| IPR002885 | Pentatricopeptide_repeat | 277 | 296 |
| IPR002885 | Pentatricopeptide_repeat | 509 | 533 |
| IPR032867 | DYW_dom | 610 | 732 |
| IPR002885 | Pentatricopeptide_repeat | 306 | 331 |
| No external refs found! |