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  5. Sopen06g023340

Sopen06g023340


Description : WD domain, G-beta repeat


Gene families : OG_42_0007309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g023340
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Brara.G03245.1 No alias component *(SMU1) of SMU splicing factor complex 0.04 Orthogroups_2024-Update
Seita.5G154200.1 No alias component *(SMU1) of SMU splicing factor complex 0.05 Orthogroups_2024-Update
Solyc06g064830 No alias WD-40 repeat protein AY032884 0.03 Orthogroups_2024-Update
evm.model.tig00000863.17 No alias (at1g73720 : 679.0) Encodes SMU1, a protein involved in... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 297 334
IPR001680 WD40_repeat 264 292
IPR001680 WD40_repeat 340 378
IPR001680 WD40_repeat 219 243
No external refs found!