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  5. Bradi1g35920

Bradi1g35920


Description : KH domain-containing protein / zinc finger (CCCH type) family protein


Gene families : OG_42_0001307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g35920
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
A4A49_09812 No alias zinc finger ccch domain-containing protein 14 0.03 Orthogroups_2024-Update
Brara.E02873.1 No alias regulatory protein *(KHZ) of autonomous floral-promotion pathway 0.04 Orthogroups_2024-Update
LOC_Os02g10080 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
Potri.016G046600 No alias KH domain-containing protein / zinc finger (CCCH type)... 0.02 Orthogroups_2024-Update
Sobic.004G078100.1 No alias regulatory protein *(KHZ) of autonomous floral-promotion pathway 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 264 289
IPR004088 KH_dom_type_1 173 235
No external refs found!