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  5. Sopen06g023620

Sopen06g023620


Description : Leucine rich repeat


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g023620
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_16559 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
A4A49_18484 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At3g04220 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g38340 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Brara.A03791.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.C04587.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01147.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.03G047900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.03G088000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G265200 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Glyma.06G310000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.09G161400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.09G202832 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G214585 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.18G116601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
MA_64427g0010 No alias (at5g36930 : 87.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
MA_746330g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_83092g0010 No alias (at5g36930 : 102.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_9114192g0010 No alias (at3g04220 : 155.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00006302-RA No alias (at1g72840 : 118.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
Potri.001G066500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G060600 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.015G043600 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Solyc01g014840 No alias disease resistance protein (TIR-NBS-LRR class) (AHRD... 0.03 Orthogroups_2024-Update
Solyc09g007710 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 68 80
IPR001611 Leu-rich_rpt 114 136
No external refs found!