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  5. Sopen06g023690

Sopen06g023690


Description : TCP family transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g023690
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_06505 No alias transcription factor tcp14 0.03 Orthogroups_2024-Update
A4A49_39012 No alias transcription factor tcp8 0.03 Orthogroups_2024-Update
A4A49_42644 No alias transcription factor tcp20 0.03 Orthogroups_2024-Update
At1g35560 No alias Transcription factor TCP23... 0.03 Orthogroups_2024-Update
At3g27010 No alias TCP20 [Source:UniProtKB/TrEMBL;Acc:A0A178VAT1] 0.02 Orthogroups_2024-Update
Brara.B00281.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Brara.B03723.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Brara.C02306.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02572.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Brara.F03236.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.02 Orthogroups_2024-Update
Brara.G02956.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G03095.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I00271.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.02 Orthogroups_2024-Update
GRMZM2G142751 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
Glyma.03G018800 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update
Mp7g09490.1 No alias transcription factor (TCP) 0.02 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.02 Orthogroups_2024-Update
Solyc03g116320 No alias TCP transcription factor 16 0.03 Orthogroups_2024-Update
Solyc06g065190 No alias TCP transcription factor 13 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 36 176
No external refs found!